Sequence Similarity Clusters for the Entities in PDB 3H82

Entity #1 | Chains: B
Aryl hydrocarbon receptor nuclear translocator protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 6380
95 % 5 19 2568 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 5 19 2641
70 % 5 19 2618
50 % 5 19 2681
40 % 5 20 2495
30 % 11 40 1254
Entity #2 | Chains: A
Endothelial PAS domain-containing protein 1 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 6765
95 % 4 14 4528 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 4 14 4570
70 % 4 15 4044
50 % 5 16 3469
40 % 5 16 3330
30 % 12 40 1254

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures