Sequence Similarity Clusters for the Entities in PDB 3H53

Entity #1 | Chains: A,B
Alpha-N-acetylgalactosaminidase protein, length: 400 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 3741
95 % 4 7 4515 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 4 7 4537
70 % 4 9 3851
50 % 4 9 3751
40 % 5 26 1119
30 % 7 28 1061

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.