Sequence Similarity Clusters for the Entities in PDB 3GDE

Entity #1 | Chains: A
DNA ligase protein, length: 558 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47320
95 % 1 1 35000
90 % 1 1 33511
70 % 1 1 30005
50 % 2 4 11792
40 % 2 4 10694
30 % 3 8 5573

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.