Sequence Similarity Clusters for the Entities in PDB 3GDE

Entity #1 | Chains: A
DNA ligase protein, length: 558 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57948
95 % 1 1 47427
90 % 1 1 45063
70 % 1 1 39604
50 % 2 4 15163
40 % 2 4 13490
30 % 3 7 7417

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures