Sequence Similarity Clusters for the Entities in PDB 3GDE

Entity #1 | Chains: A
DNA ligase protein, length: 558 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51699
95 % 1 1 38263
90 % 1 1 36546
70 % 1 1 32524
50 % 2 4 12873
40 % 2 4 11651
30 % 3 8 6078

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures