POP-OUT | CLOSE

An Information Portal to 105212 Biological Macromolecular Structures

Crystal structure of the human TLR4-human MD-2-E.coli LPS Ra complex
Sequence Clustering and Redundancy Reduction Results
3FXI
Sequence Clusters for the Sequence Entities in PDB 3FXI
Entity #1: Chains: A,B - Toll-like receptor 4 protein, length: 605 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 23372
95% 2 2 11639
90% 2 2 11457
70% 2 2 10832
50% 5 5 5130
40% 5 5 4803
30% 8 8 2034
Entity #2: Chains: C,D - Lymphocyte antigen 96 protein, length: 142 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 6 4814
95% 5 6 5382
90% 5 6 5396
70% 5 6 5296
50% 8 9 3249
40% 8 9 3136
30% 8 9 2909
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.