Sequence Similarity Clusters for the Entities in PDB 3FXI

Entity #1 | Chains: A,B
Toll-like receptor 4 protein, length: 605 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 29475
95 % 2 2 14570
90 % 2 2 14302
70 % 2 2 13423
50 % 9 9 3569
40 % 9 9 3445
30 % 20 21 1434
Entity #2 | Chains: C,D
Lymphocyte antigen 96 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 6251
95 % 5 6 6799
90 % 5 6 6774
70 % 5 6 6578
50 % 11 12 2781
40 % 11 12 2753
30 % 11 12 2577

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.