Sequence Similarity Clusters for the Entities in PDB 3FXI

Entity #1 | Chains: A,B
Toll-like receptor 4 protein, length: 605 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 27680
95 % 2 2 13709
90 % 2 2 13458
70 % 2 2 12666
50 % 9 9 3354
40 % 9 9 3238
30 % 20 21 1355
Entity #2 | Chains: C,D
Lymphocyte antigen 96 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 5803
95 % 5 6 6368
90 % 5 6 6348
70 % 5 6 6196
50 % 11 12 2593
40 % 11 12 2576
30 % 11 12 2410

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.