Sequence Similarity Clusters for the Entities in PDB 3FXI

Entity #1 | Chains: A,B
Toll-like receptor 4 protein, length: 605 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 29102
95 % 2 2 14352
90 % 2 2 14089
70 % 2 2 13221
50 % 9 9 3517
40 % 9 9 3398
30 % 20 21 1415
Entity #2 | Chains: C,D
Lymphocyte antigen 96 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 6135
95 % 5 6 6673
90 % 5 6 6655
70 % 5 6 6478
50 % 11 12 2736
40 % 11 12 2704
30 % 11 12 2539

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.