Sequence Similarity Clusters for the Entities in PDB 3FXI

Entity #1 | Chains: A,B
Toll-like receptor 4 protein, length: 605 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 27499
95 % 2 2 13609
90 % 2 2 13356
70 % 2 2 12575
50 % 9 9 3331
40 % 9 9 3220
30 % 20 21 1346
Entity #2 | Chains: C,D
Lymphocyte antigen 96 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 5759
95 % 5 6 6324
90 % 5 6 6306
70 % 5 6 6153
50 % 11 12 2580
40 % 11 12 2565
30 % 11 12 2397

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.