Sequence Similarity Clusters for the Entities in PDB 3FXI

Entity #1 | Chains: A,B
Toll-like receptor 4 protein, length: 605 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 26903
95 % 2 2 13292
90 % 2 2 13043
70 % 2 2 12279
50 % 9 9 3254
40 % 9 9 3157
30 % 20 21 1316
Entity #2 | Chains: C,D
Lymphocyte antigen 96 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 5624
95 % 5 6 6194
90 % 5 6 6173
70 % 5 6 6021
50 % 11 12 2519
40 % 11 12 2508
30 % 11 12 2352

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.