Sequence Similarity Clusters for the Entities in PDB 3FXI

Entity #1 | Chains: A,B
Toll-like receptor 4 protein, length: 605 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 26291
95 % 2 2 12997
90 % 2 2 12751
70 % 2 2 12012
50 % 8 8 3658
40 % 8 8 3503
30 % 19 20 1362
Entity #2 | Chains: C,D
Lymphocyte antigen 96 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 5480
95 % 5 6 6066
90 % 5 6 6046
70 % 5 6 5902
50 % 10 11 2749
40 % 10 11 2694
30 % 10 11 2530

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.