Sequence Similarity Clusters for the Entities in PDB 3FXI

Entity #1 | Chains: A,B
Toll-like receptor 4 protein, length: 605 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 29276
95 % 2 2 14461
90 % 2 2 14191
70 % 2 2 13318
50 % 9 9 3544
40 % 9 9 3420
30 % 20 21 1427
Entity #2 | Chains: C,D
Lymphocyte antigen 96 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 6195
95 % 5 6 6736
90 % 5 6 6714
70 % 5 6 6529
50 % 11 12 2758
40 % 11 12 2726
30 % 11 12 2558

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.