Sequence Similarity Clusters for the Entities in PDB 3FEY

Entity #1 | Chains: A
Nuclear cap-binding protein subunit 1 protein, length: 790 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 7636
95 % 3 8 3027 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 3 8 3074
70 % 3 8 3045
50 % 3 8 2989
40 % 3 8 2945
30 % 3 8 2756
Entity #2 | Chains: B
Nuclear cap-binding protein subunit 2 protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 9 2572
95 % 2 9 3213 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 0.9
PDBFlex
90 % 2 9 3259
70 % 2 9 3220
50 % 2 9 3135
40 % 2 9 3053
30 % 2 9 2863
Entity #3 | Chains: C
Importin subunit alpha-2 protein, length: 467 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 11451
95 % 2 6 8381 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 35 73 635
70 % 35 73 681
50 % 39 97 446
40 % 41 101 458
30 % 41 101 457

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures