Sequence Similarity Clusters for the Entities in PDB 3FEY

Entity #1 | Chains: A
Nuclear cap-binding protein subunit 1 protein, length: 790 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 8653
95 % 3 11 2695 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 3 11 2671
70 % 3 11 2654
50 % 3 11 2632
40 % 3 11 2565
30 % 3 11 2407
Entity #2 | Chains: B
Nuclear cap-binding protein subunit 2 protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 9 2908
95 % 2 9 3218 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 0.9
PDBFlex
90 % 2 9 3275
70 % 2 9 3230
50 % 2 9 3170
40 % 2 9 3068
30 % 2 9 2833
Entity #3 | Chains: C
Importin subunit alpha-2 protein, length: 467 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 14491
95 % 2 6 10060 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 40 78 609
70 % 40 78 653
50 % 44 102 452
40 % 46 106 471
30 % 46 107 460

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures