Sequence Similarity Clusters for the Entities in PDB 3F1O

Entity #1 | Chains: A
Endothelial PAS domain-containing protein 1 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 9 5549
95 % 5 11 5096
90 % 5 11 5105
70 % 5 12 4312
50 % 6 13 3615
40 % 6 13 3470
30 % 11 31 1282
Entity #2 | Chains: B
Aryl hydrocarbon receptor nuclear translocator protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 9 4785
95 % 6 17 2332
90 % 6 17 2375
70 % 6 17 2371
50 % 6 17 2369
40 % 6 17 2360
30 % 12 31 1282

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.