Sequence Similarity Clusters for the Entities in PDB 3F1O

Entity #1 | Chains: A
Endothelial PAS domain-containing protein 1 protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 9 6098
95 % 5 14 4078
90 % 5 14 4109
70 % 5 15 3829
50 % 6 16 3246
40 % 6 16 3141
30 % 13 40 1121
Entity #2 | Chains: B
Aryl hydrocarbon receptor nuclear translocator protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 9 5263
95 % 6 19 2358
90 % 6 19 2405
70 % 6 19 2395
50 % 6 19 2355
40 % 6 19 2338
30 % 14 40 1121

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.