Sequence Similarity Clusters for the Entities in PDB 3EUB

Entity #1 | Chains: 2,A,J,S
Xanthine dehydrogenase/oxidase protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 2469
95 % 8 9 3107 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 8 9 3154
70 % 8 9 3123
50 % 8 9 3051
40 % 8 9 2979
30 % 8 9 2790
Entity #2 | Chains: 3,B,K,T
Xanthine dehydrogenase/oxidase protein, length: 305 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 2366
95 % 8 9 3004 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 8 9 3053
70 % 8 9 3038
50 % 8 9 2978
40 % 8 9 2924
30 % 8 9 2736
Entity #3 | Chains: 4,C,L,U
Xanthine dehydrogenase/oxidase protein, length: 762 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 1996
95 % 10 11 2570 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 10 11 2617
70 % 10 11 2605
50 % 10 11 2573
40 % 10 17 1187
30 % 10 17 1161

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.