Sequence Similarity Clusters for the Entities in PDB 3ERD

Entity #1 | Chains: A,B
ESTROGEN RECEPTOR ALPHA protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 74 223 47
95 % 94 273 20 Flexibility: Low
Max RMSD: 7.3, Avg RMSD: 1.5
PDBFlex
90 % 94 273 22
70 % 94 273 30
50 % 99 309 51
40 % 104 331 50
30 % 366 1265 8
Entity #2 | Chains: C,D
GLUCOCORTICOID RECEPTOR INTERACTING PROTEIN 1 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures