Sequence Similarity Clusters for the Entities in PDB 3ERD

Entity #1 | Chains: A,B
ESTROGEN RECEPTOR ALPHA protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 75 223 49
95 % 96 273 33 Flexibility: Low
Max RMSD: 7.3, Avg RMSD: 1.5
PDBFlex
90 % 96 273 36
70 % 96 273 48
50 % 101 309 68
40 % 106 331 60
30 % 380 1308 8
Entity #2 | Chains: C,D
GLUCOCORTICOID RECEPTOR INTERACTING PROTEIN 1 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures