Sequence Similarity Clusters for the Entities in PDB 3EOY

Entity #1 | Chains: A,B,C,D,E,F
Outer capsid protein sigma-1 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 2737
95 % 4 4 2436
90 % 4 4 2491
70 % 4 4 2481
50 % 4 4 2444
40 % 4 4 2415
30 % 4 4 2292
Entity #2 | Chains: G,H,I,J,K,L
Junctional adhesion molecule A protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 7094
95 % 2 2 7640
90 % 2 2 7599
70 % 2 2 7353
50 % 2 2 6789
40 % 2 2 6308
30 % 2 2 5622

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.