Sequence Similarity Clusters for the Entities in PDB 3EOY

Entity #1 | Chains: A,B,C,D,E,F
Outer capsid protein sigma-1 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 4445
95 % 3 3 3077
90 % 3 3 3125
70 % 3 3 3105
50 % 3 3 3024
40 % 3 3 2947
30 % 3 3 2750
Entity #2 | Chains: G,H,I,J,K,L
Junctional adhesion molecule A protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 6327
95 % 2 2 6880
90 % 2 2 6847
70 % 2 2 6644
50 % 2 2 6175
40 % 2 2 5766
30 % 2 2 5158

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.