Sequence Similarity Clusters for the Entities in PDB 3EOY

Entity #1 | Chains: A,B,C,D,E,F
Outer capsid protein sigma-1 protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 4759
95 % 3 3 3292
90 % 3 3 3340
70 % 3 3 3295
50 % 3 3 3220
40 % 3 3 3119
30 % 3 3 2906
Entity #2 | Chains: G,H,I,J,K,L
Junctional adhesion molecule A protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 6777
95 % 2 2 7314
90 % 2 2 7284
70 % 2 2 7053
50 % 2 2 6533
40 % 2 2 6093
30 % 2 2 5438

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.