Sequence Similarity Clusters for the Entities in PDB 3DVL

Entity #1 | Chains: A,B,C,D,E,F
Circadian clock protein kinase kaiC protein, length: 519 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 7 1372
95 % 3 22 514 Flexibility: Low
Max RMSD: 5.9, Avg RMSD: 1.1
PDBFlex
90 % 3 22 546
70 % 4 24 539
50 % 4 24 590
40 % 4 24 630
30 % 4 24 618

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.