Sequence Similarity Clusters for the Entities in PDB 3DNF

Entity #1 | Chains: A,B
4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36726
95 % 1 1 28772 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.8
PDBFlex
90 % 1 1 27779
70 % 1 1 25090
50 % 1 1 21509
40 % 1 1 18988
30 % 9 29 986

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.