Sequence Similarity Clusters for the Entities in PDB 3DNF

Entity #1 | Chains: A,B
4-hydroxy-3-methylbut-2-enyl diphosphate reductase protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37524
95 % 1 1 29350 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.8
PDBFlex
90 % 1 1 28318
70 % 1 1 25544
50 % 1 1 21887
40 % 1 1 19310
30 % 9 29 1010

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures