Sequence Similarity Clusters for the Entities in PDB 3DHV

Entity #1 | Chains: A
D-alanine-poly(phosphoribitol) ligase protein, length: 512 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 17098
95 % 3 4 15734 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 3 4 15444
70 % 3 4 14491
50 % 3 6 9491
40 % 3 8 4790
30 % 54 104 295

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.