Sequence Similarity Clusters for the Entities in PDB 3DHU

Entity #1 | Chains: A,B,C,D
Alpha-amylase protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17959
95 % 1 1 16338 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 16032
70 % 1 1 14988
50 % 1 1 13213
40 % 1 1 11938
30 % 1 1 10364

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures