Sequence Similarity Clusters for the Entities in PDB 3DDK

Entity #1 | Chains: A
RNA polymerase B3 3Dpol protein, length: 462 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 3542
95 % 13 19 2025 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 13 19 2072
70 % 19 54 567
50 % 19 70 474
40 % 19 70 509
30 % 22 99 348

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.