Sequence Similarity Clusters for the Entities in PDB 3DDK

Entity #1 | Chains: A
RNA polymerase B3 3Dpol protein, length: 462 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 14 2473
95 % 13 19 2165 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 13 19 2222
70 % 19 54 596
50 % 19 71 487
40 % 19 71 534
30 % 22 100 396

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures