Sequence Similarity Clusters for the Entities in PDB 3D4D

Entity #1 | Chains: A,B
Thermonuclease protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44171
95 % 163 163 209 Flexibility: Low
Max RMSD: 17.1, Avg RMSD: 1.0
PDBFlex
90 % 279 292 84
70 % 279 292 102
50 % 279 292 140
40 % 279 292 155
30 % 279 292 171

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.