Sequence Similarity Clusters for the Entities in PDB 3D4D

Entity #1 | Chains: A,B
Thermonuclease protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44735
95 % 163 163 215 Flexibility: Low
Max RMSD: 17.1, Avg RMSD: 1.0
PDBFlex
90 % 279 292 90
70 % 279 292 108
50 % 279 292 145
40 % 279 292 160
30 % 279 292 172

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures