Sequence Similarity Clusters for the Entities in PDB 3D4D

Entity #1 | Chains: A,B
Thermonuclease protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28679
95 % 279 292 111 Flexibility: Low
Max RMSD: 17.1, Avg RMSD: 1.0
PDBFlex
90 % 279 292 115
70 % 279 292 129
50 % 279 292 160
40 % 279 292 171
30 % 279 292 190

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures