Sequence Similarity Clusters for the Entities in PDB 3CPL

Entity #1 | Chains: A,C
H-2 class I histocompatibility antigen, D-B alpha chain protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 46 247
95 % 25 50 333
90 % 26 52 347
70 % 503 656 7
50 % 504 661 7
40 % 539 709 11
30 % 587 826 14
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 87 131 93
95 % 123 212 65
90 % 123 212 70
70 % 626 856 5
50 % 636 876 4
40 % 636 876 9
30 % 636 876 13
Entity #3 | Chains: E,F
NP366 peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.