Sequence Similarity Clusters for the Entities in PDB 3CPL

Entity #1 | Chains: A,C
H-2 class I histocompatibility antigen, D-B alpha chain protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 44 238
95 % 25 48 324
90 % 26 50 339
70 % 472 617 7
50 % 473 622 7
40 % 501 662 11
30 % 547 775 13
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 87 131 86
95 % 123 210 60
90 % 123 210 63
70 % 586 806 5
50 % 595 824 5
40 % 595 824 9
30 % 595 824 12
Entity #3 | Chains: E,F
NP366 peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.