Sequence Similarity Clusters for the Entities in PDB 3CLC

Entity #1 | Chains: A,B,C,D
Regulatory protein protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 14 732
95 % 13 21 632 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 13 21 660
70 % 13 21 707
50 % 13 21 752
40 % 13 21 780
30 % 13 21 775
Entity #2 | Chains: E
35-MER dna, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: F
35-MER dna, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.