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An Information Portal to 110071 Biological Macromolecular Structures

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482C
Sequence Clustering and Redundancy Reduction Results
3CCU
Sequence Clusters for the Sequence Entities in PDB 3CCU
Entity #1: Chains: A - 50S ribosomal protein L2P protein, length: 240 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 24 47 575
95% 25 68 472
90% 25 68 495
70% 25 68 533
50% 25 121 244
40% 25 123 265
30% 25 123 283
Entity #10: Chains: J - 50S ribosomal protein L13P protein, length: 145 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 25 74 291
95% 25 74 419
90% 25 74 445
70% 25 74 479
50% 25 74 533
40% 26 77 533
30% 26 78 531
Entity #11: Chains: K - 50S ribosomal protein L14P protein, length: 132 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 10 44 672
95% 25 68 479
90% 25 68 503
70% 25 68 541
50% 25 123 238
40% 25 123 266
30% 28 360 44
Entity #12: Chains: L - 50S ribosomal protein L15P protein, length: 165 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 25 74 290
95% 25 74 418
90% 25 74 444
70% 25 74 477
50% 25 74 531
40% 25 74 570
30% 27 352 50
Entity #13: Chains: M - 50S ribosomal protein L15e protein, length: 196 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 9 23 1561
95% 24 47 839
90% 24 47 872
70% 25 68 534
50% 25 121 245
40% 25 121 271
30% 25 121 287
Entity #14: Chains: N - 50S ribosomal protein L18P protein, length: 187 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 25 74 288
95% 25 74 416
90% 25 74 442
70% 25 74 474
50% 25 76 501
40% 25 76 544
30% 25 78 530
Entity #15: Chains: O - 50S ribosomal protein L18e protein, length: 116 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 25 68 328
95% 25 68 481
90% 25 68 506
70% 25 68 544
50% 25 70 588
40% 25 70 625
30% 25 70 627
Entity #16: Chains: P - 50S ribosomal protein L19e protein, length: 149 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 24 47 584
95% 25 68 477
90% 25 68 501
70% 25 68 539
50% 25 68 623
40% 25 70 624
30% 25 71 607
Entity #17: Chains: Q - 50S ribosomal protein L21e protein, length: 96 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 25 68 330
95% 25 68 483
90% 25 68 508
70% 25 68 547
50% 25 70 591
40% 25 70 629
30% 25 71 609
Entity #18: Chains: R - 50S ribosomal protein L22P protein, length: 155 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 25 67 339
95% 25 68 475
90% 25 68 499
70% 25 68 537
50% 25 68 620
40% 25 68 652
30% 25 124 276
Entity #19: Chains: S - 50S ribosomal protein L23P protein, length: 85 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 25 74 295
95% 25 74 421
90% 25 74 447
70% 25 74 481
50% 25 76 506
40% 25 78 525
30% 27 309 60
Entity #2: Chains: B - 50S ribosomal protein L3P protein, length: 338 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 25 67 336
95% 25 74 409
90% 25 74 435
70% 25 74 469
50% 25 74 522
40% 25 127 254
30% 25 127 269
Entity #20: Chains: T - 50S ribosomal protein L24P protein, length: 120 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 25 74 293
95% 25 74 420
90% 25 74 446
70% 25 74 480
50% 25 130 223
40% 25 130 247
30% 25 130 262
Entity #21: Chains: U - 50S ribosomal protein L24e protein, length: 67 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 24 70 316
95% 24 70 461
90% 24 70 482
70% 24 70 517
50% 24 70 593
40% 24 70 631
30% 24 70 630
Entity #22: Chains: V - 50S ribosomal protein L29P protein, length: 71 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 25 74 297
95% 25 74 422
90% 25 74 448
70% 25 74 482
50% 25 74 535
40% 25 74 574
30% 25 74 569
Entity #23: Chains: W - 50S ribosomal protein L30P protein, length: 154 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 25 68 326
95% 25 68 476
90% 25 68 500
70% 25 68 538
50% 25 68 621
40% 25 70 623
30% 25 71 606
Entity #24: Chains: X - 50S ribosomal protein L31e protein, length: 92 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 25 68 332
95% 25 68 485
90% 25 68 510
70% 25 68 549
50% 25 68 627
40% 25 68 658
30% 25 68 656
Entity #25: Chains: Y - 50S ribosomal protein L32e protein, length: 241 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 24 63 363
95% 24 63 534
90% 24 63 562
70% 24 63 613
50% 24 63 691
40% 24 63 721
30% 24 63 726
Entity #26: Chains: Z - 50S ribosomal protein L37Ae protein, length: 116 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 17 2357
95% 6 17 2970
90% 6 17 3015
70% 6 17 3024
50% 6 17 2978
40% 6 17 2900
30% 6 17 2704
Entity #27: Chains: 1 - 50S ribosomal protein L37e protein, length: 57 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 25 68 334
95% 25 68 487
90% 25 68 512
70% 25 68 551
50% 25 69 612
40% 25 69 646
30% 25 69 644
Entity #28: Chains: 2 - 50S ribosomal protein L39e protein, length: 50 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 24 47 591
95% 25 68 488
90% 25 68 513
70% 25 68 552
50% 25 123 239
40% 25 123 267
30% 25 123 284
Entity #29: Chains: 3 - 50S ribosomal protein L44E protein, length: 92 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 25 68 331
95% 25 68 484
90% 25 68 509
70% 25 68 548
50% 25 68 626
40% 25 68 657
30% 25 122 286
Entity #3: Chains: C - 50S ribosomal protein L4P protein, length: 246 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 9 23 1554
95% 25 74 413
90% 25 74 439
70% 25 74 473
50% 25 74 524
40% 25 76 540
30% 25 77 535
Entity #30: Chains: 0 - 23S RIBOSOMAL RNA rna, length: 2923 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #31: Chains: 9 - 5S RIBOSOMAL RNA rna, length: 122 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: D - 50S ribosomal protein L5P protein, length: 177 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 25 74 289
95% 25 74 417
90% 25 74 443
70% 25 74 475
50% 25 74 529
40% 25 128 250
30% 25 128 266
Entity #5: Chains: E - 50S ribosomal protein L6P protein, length: 178 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 25 68 325
95% 25 68 474
90% 25 68 498
70% 25 68 536
50% 25 68 619
40% 25 122 269
30% 28 355 49
Entity #6: Chains: F - 50S ribosomal protein L7Ae protein, length: 120 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 24 47 586
95% 24 47 848
90% 25 68 505
70% 25 68 543
50% 39 95 315
40% 45 105 295
30% 45 107 308
Entity #7: Chains: G - 50S ribosomal protein L10E protein, length: 348 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 20 1829
95% 24 64 517
90% 24 64 543
70% 24 64 591
50% 24 64 670
40% 24 64 699
30% 24 65 695
Entity #8: Chains: H - 50S ribosomal protein L10e protein, length: 177 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 24 47 579
95% 24 47 841
90% 24 47 874
70% 24 47 908
50% 25 74 530
40% 25 79 512
30% 25 79 522
Entity #9: Chains: I - 50S ribosomal protein L11P protein, length: 162 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 22 42 709
95% 22 42 989
90% 22 42 1009
70% 22 42 1039
50% 22 43 1060
40% 22 43 1081
30% 22 57 805
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.