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Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482A
Sequence Clustering and Redundancy Reduction Results
3CCS
Sequence Clusters for the Sequence Entities in PDB 3CCS
Entity #1: Chains: A - 50S ribosomal protein L2P protein, length: 240 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 36 46 546
95% 39 67 467
90% 39 67 492
70% 39 67 530
50% 39 136 240
40% 39 138 265
30% 39 138 284
Entity #10: Chains: J - 50S ribosomal protein L13P protein, length: 145 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 74 282
95% 40 74 399
90% 40 74 425
70% 40 74 451
50% 40 74 500
40% 41 77 504
30% 41 78 508
Entity #11: Chains: K - 50S ribosomal protein L14P protein, length: 132 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 19 44 614
95% 40 68 454
90% 40 68 478
70% 40 68 513
50% 40 139 233
40% 40 139 261
30% 47 451 47
Entity #12: Chains: L - 50S ribosomal protein L15P protein, length: 165 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 74 281
95% 40 74 398
90% 40 74 424
70% 40 74 450
50% 40 74 498
40% 40 74 532
30% 46 443 53
Entity #13: Chains: M - 50S ribosomal protein L15e protein, length: 196 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 16 23 1464
95% 37 47 772
90% 37 47 802
70% 40 68 505
50% 40 137 237
40% 40 137 270
30% 40 137 291
Entity #14: Chains: N - 50S ribosomal protein L18P protein, length: 187 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 74 279
95% 40 74 396
90% 40 74 422
70% 40 74 448
50% 40 76 481
40% 40 76 513
30% 40 78 505
Entity #15: Chains: O - 50S ribosomal protein L18e protein, length: 116 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 68 318
95% 40 68 456
90% 40 68 481
70% 40 68 517
50% 40 70 541
40% 40 70 574
30% 40 70 573
Entity #16: Chains: P - 50S ribosomal protein L19e protein, length: 149 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 37 47 530
95% 40 68 452
90% 40 68 476
70% 40 68 511
50% 40 68 568
40% 40 70 572
30% 40 71 556
Entity #17: Chains: Q - 50S ribosomal protein L21e protein, length: 96 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 68 321
95% 40 68 458
90% 40 68 483
70% 40 68 519
50% 40 70 543
40% 40 70 577
30% 40 71 559
Entity #18: Chains: R - 50S ribosomal protein L22P protein, length: 155 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 39 67 331
95% 40 68 450
90% 40 68 474
70% 40 68 509
50% 40 68 565
40% 40 68 600
30% 40 140 275
Entity #19: Chains: S - 50S ribosomal protein L23P protein, length: 85 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 74 286
95% 40 74 401
90% 40 74 427
70% 40 74 453
50% 40 76 482
40% 40 78 496
30% 46 384 70
Entity #2: Chains: B - 50S ribosomal protein L3P protein, length: 338 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 39 67 328
95% 40 74 391
90% 40 74 418
70% 40 74 445
50% 40 74 493
40% 40 143 247
30% 40 143 263
Entity #20: Chains: T - 50S ribosomal protein L24P protein, length: 120 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 74 285
95% 40 74 400
90% 40 74 426
70% 40 74 452
50% 40 146 214
40% 40 146 244
30% 40 146 261
Entity #21: Chains: U - 50S ribosomal protein L24e protein, length: 67 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 38 70 305
95% 38 70 434
90% 38 70 455
70% 38 70 487
50% 38 70 545
40% 38 70 579
30% 38 70 575
Entity #22: Chains: V - 50S ribosomal protein L29P protein, length: 71 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 74 287
95% 40 74 402
90% 40 74 428
70% 40 74 454
50% 40 74 502
40% 40 74 535
30% 40 74 535
Entity #23: Chains: W - 50S ribosomal protein L30P protein, length: 154 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 68 316
95% 40 68 451
90% 40 68 475
70% 40 68 510
50% 40 68 566
40% 40 70 571
30% 40 71 555
Entity #24: Chains: X - 50S ribosomal protein L31e protein, length: 92 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 68 323
95% 40 68 460
90% 40 68 485
70% 40 68 521
50% 40 68 574
40% 40 68 606
30% 40 68 598
Entity #25: Chains: Y - 50S ribosomal protein L32e protein, length: 241 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 37 63 348
95% 37 63 506
90% 37 63 529
70% 37 63 570
50% 37 63 643
40% 37 63 668
30% 37 63 666
Entity #26: Chains: Z - 50S ribosomal protein L37Ae protein, length: 116 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 12 17 2199
95% 12 17 2767
90% 12 17 2814
70% 12 17 2818
50% 12 17 2802
40% 12 17 2739
30% 12 17 2551
Entity #27: Chains: 1 - 50S ribosomal protein L37e protein, length: 57 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 68 325
95% 40 68 462
90% 40 68 487
70% 40 68 523
50% 40 69 558
40% 40 69 593
30% 40 69 589
Entity #28: Chains: 2 - 50S ribosomal protein L39e protein, length: 50 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 37 47 539
95% 40 68 463
90% 40 68 488
70% 40 68 524
50% 40 139 235
40% 40 139 263
30% 40 139 278
Entity #29: Chains: 3 - 50S ribosomal protein L44E protein, length: 92 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 68 322
95% 40 68 459
90% 40 68 484
70% 40 68 520
50% 40 68 573
40% 40 68 605
30% 40 138 286
Entity #3: Chains: C - 50S ribosomal protein L4P protein, length: 246 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 16 23 1459
95% 40 74 394
90% 40 74 420
70% 40 74 447
50% 40 74 495
40% 40 76 512
30% 40 77 510
Entity #30: Chains: 0 - 23S RIBOSOMAL RNA rna, length: 2923 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #31: Chains: 9 - 5S RIBOSOMAL RNA rna, length: 122 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: D - 50S ribosomal protein L5P protein, length: 177 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 74 280
95% 40 74 397
90% 40 74 423
70% 40 74 449
50% 40 74 496
40% 40 143 249
30% 40 143 265
Entity #5: Chains: E - 50S ribosomal protein L6P protein, length: 178 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 68 315
95% 40 68 449
90% 40 68 473
70% 40 68 508
50% 40 68 563
40% 40 138 266
30% 47 446 51
Entity #6: Chains: F - 50S ribosomal protein L7Ae protein, length: 120 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 37 47 536
95% 37 47 782
90% 40 68 480
70% 40 68 516
50% 56 97 290
40% 62 106 282
30% 62 108 301
Entity #7: Chains: G - 50S ribosomal protein L10E protein, length: 348 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 15 20 1708
95% 38 64 491
90% 38 64 514
70% 38 64 557
50% 38 64 624
40% 38 64 654
30% 38 65 641
Entity #8: Chains: H - 50S ribosomal protein L10e protein, length: 177 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 37 47 527
95% 37 47 774
90% 37 47 804
70% 37 47 844
50% 40 74 497
40% 40 78 492
30% 40 78 507
Entity #9: Chains: I - 50S ribosomal protein L11P protein, length: 162 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 34 42 656
95% 34 42 913
90% 34 42 937
70% 34 42 969
50% 34 43 993
40% 34 43 1020
30% 34 55 787
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.