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Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488C. Density for anisomycin is visible but not included in the model.
Sequence Clustering and Redundancy Reduction Results
3CCR
Sequence Clusters for the Sequence Entities in PDB 3CCR
Entity #1: Chains: A - 50S ribosomal protein L2P protein, length: 240 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 39 46 508
95% 42 67 458
90% 42 67 481
70% 42 67 513
50% 42 102 330
40% 42 104 344
30% 42 104 355
Entity #10: Chains: J - 50S ribosomal protein L13P protein, length: 145 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 43 74 275
95% 43 74 394
90% 43 74 418
70% 43 74 442
50% 43 74 491
40% 44 77 492
30% 44 78 498
Entity #11: Chains: K - 50S ribosomal protein L14P protein, length: 132 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 22 44 545
95% 43 68 446
90% 43 68 468
70% 43 68 498
50% 43 105 318
40% 43 105 341
30% 48 402 54
Entity #12: Chains: L - 50S ribosomal protein L15P protein, length: 165 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 43 74 274
95% 43 74 393
90% 43 74 417
70% 43 74 441
50% 43 74 490
40% 43 74 521
30% 47 394 61
Entity #13: Chains: M - 50S ribosomal protein L15e protein, length: 196 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 19 23 1368
95% 40 47 726
90% 40 47 753
70% 43 68 491
50% 43 103 328
40% 43 103 350
30% 43 103 361
Entity #14: Chains: N - 50S ribosomal protein L18P protein, length: 187 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 43 74 272
95% 43 74 391
90% 43 74 415
70% 43 74 439
50% 43 76 472
40% 43 76 501
30% 43 78 495
Entity #15: Chains: O - 50S ribosomal protein L18e protein, length: 116 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 43 68 310
95% 43 68 448
90% 43 68 471
70% 43 68 501
50% 43 70 526
40% 43 70 554
30% 43 70 559
Entity #16: Chains: P - 50S ribosomal protein L19e protein, length: 149 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 47 497
95% 43 68 444
90% 43 68 466
70% 43 68 496
50% 43 68 551
40% 43 70 553
30% 43 71 545
Entity #17: Chains: Q - 50S ribosomal protein L21e protein, length: 96 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 43 68 312
95% 43 68 449
90% 43 68 472
70% 43 68 502
50% 43 70 528
40% 43 70 557
30% 43 71 547
Entity #18: Chains: R - 50S ribosomal protein L22P protein, length: 155 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 42 67 323
95% 43 68 442
90% 43 68 464
70% 43 68 494
50% 43 68 548
40% 43 68 580
30% 43 106 348
Entity #19: Chains: S - 50S ribosomal protein L23P protein, length: 85 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 43 74 279
95% 43 74 396
90% 43 74 420
70% 43 74 444
50% 43 76 473
40% 43 78 483
30% 47 369 73
Entity #2: Chains: B - 50S ribosomal protein L3P protein, length: 338 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 42 67 320
95% 43 74 386
90% 43 74 411
70% 43 74 436
50% 43 74 485
40% 43 109 318
30% 43 109 332
Entity #20: Chains: T - 50S ribosomal protein L24P protein, length: 120 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 43 74 278
95% 43 74 395
90% 43 74 419
70% 43 74 443
50% 43 112 286
40% 43 112 310
30% 43 112 326
Entity #21: Chains: U - 50S ribosomal protein L24e protein, length: 67 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 41 70 299
95% 41 70 426
90% 41 70 446
70% 41 70 474
50% 41 70 529
40% 41 70 558
30% 41 70 560
Entity #22: Chains: V - 50S ribosomal protein L29P protein, length: 71 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 43 74 280
95% 43 74 397
90% 43 74 421
70% 43 74 445
50% 43 74 492
40% 43 74 523
30% 43 74 525
Entity #23: Chains: W - 50S ribosomal protein L30P protein, length: 154 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 43 68 308
95% 43 68 443
90% 43 68 465
70% 43 68 495
50% 43 68 549
40% 43 70 552
30% 43 71 544
Entity #24: Chains: X - 50S ribosomal protein L31e protein, length: 92 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 43 68 314
95% 43 68 451
90% 43 68 474
70% 43 68 504
50% 43 68 554
40% 43 68 584
30% 43 68 581
Entity #25: Chains: Y - 50S ribosomal protein L32e protein, length: 241 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 63 343
95% 40 63 492
90% 40 63 515
70% 40 63 550
50% 40 63 599
40% 40 63 626
30% 40 63 629
Entity #26: Chains: Z - 50S ribosomal protein L37Ae protein, length: 116 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 15 17 2101
95% 15 17 2665
90% 15 17 2715
70% 15 17 2730
50% 15 17 2748
40% 15 17 2695
30% 15 17 2505
Entity #27: Chains: 1 - 50S ribosomal protein L37e protein, length: 57 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 43 68 316
95% 43 68 453
90% 43 68 476
70% 43 68 506
50% 43 69 541
40% 43 69 572
30% 43 69 572
Entity #28: Chains: 2 - 50S ribosomal protein L39e protein, length: 50 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 47 501
95% 43 68 454
90% 43 68 477
70% 43 68 507
50% 43 105 321
40% 43 105 343
30% 43 105 354
Entity #29: Chains: 3 - 50S ribosomal protein L44E protein, length: 92 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 43 68 313
95% 43 68 450
90% 43 68 473
70% 43 68 503
50% 43 68 553
40% 43 68 583
30% 43 104 358
Entity #3: Chains: C - 50S ribosomal protein L4P protein, length: 246 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 19 23 1364
95% 43 74 389
90% 43 74 413
70% 43 74 438
50% 43 74 487
40% 43 76 500
30% 43 77 502
Entity #30: Chains: 0 - 23S RIBOSOMAL RNA rna, length: 2923 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #31: Chains: 9 - 5S RIBOSOMAL RNA rna, length: 122 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: D - 50S ribosomal protein L5P protein, length: 177 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 43 74 273
95% 43 74 392
90% 43 74 416
70% 43 74 440
50% 43 74 488
40% 43 109 320
30% 43 109 335
Entity #5: Chains: E - 50S ribosomal protein L6P protein, length: 178 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 43 68 307
95% 43 68 441
90% 43 68 463
70% 43 68 493
50% 43 68 547
40% 43 104 346
30% 48 397 60
Entity #6: Chains: F - 50S ribosomal protein L7Ae protein, length: 120 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 47 499
95% 40 47 736
90% 43 68 470
70% 43 68 500
50% 61 97 279
40% 67 106 271
30% 67 108 290
Entity #7: Chains: G - 50S ribosomal protein L10E protein, length: 348 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 18 20 1603
95% 41 64 480
90% 41 64 503
70% 41 64 534
50% 41 64 585
40% 41 64 613
30% 41 65 607
Entity #8: Chains: H - 50S ribosomal protein L10e protein, length: 177 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 40 47 494
95% 40 47 728
90% 40 47 755
70% 40 47 794
50% 43 74 489
40% 43 78 480
30% 43 78 497
Entity #9: Chains: I - 50S ribosomal protein L11P protein, length: 162 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 37 42 577
95% 37 42 830
90% 37 42 855
70% 37 42 888
50% 37 43 920
40% 37 43 946
30% 37 55 727
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.