Sequence Similarity Clusters for the Entities in PDB 3CC2

Entity #1 | Chains: A
50S ribosomal protein L2P protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 47 679
95 % 9 68 531
90 % 9 68 559
70 % 9 68 609
50 % 9 140 231
40 % 9 142 255
30 % 9 142 261
Entity #10 | Chains: J
50S ribosomal protein L13P protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 74 319
95 % 9 74 472
90 % 9 74 501
70 % 9 74 547
50 % 9 74 634
40 % 10 77 640
30 % 10 78 640
Entity #11 | Chains: K
50S ribosomal protein L14P protein, length: 132 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 44 755
95 % 9 68 537
90 % 9 68 565
70 % 9 68 616
50 % 9 145 221
40 % 9 145 247
30 % 12 442 34
Entity #12 | Chains: L
50S ribosomal protein L15P protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 74 318
95 % 9 74 471
90 % 9 74 499
70 % 9 74 544
50 % 9 74 631
40 % 9 74 676
30 % 11 431 37
Entity #13 | Chains: M
50S ribosomal protein L15e protein, length: 196 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 23 1755
95 % 8 47 962
90 % 8 47 985
70 % 9 68 610
50 % 9 140 232
40 % 9 140 260
30 % 9 140 270
Entity #14 | Chains: N
50S ribosomal protein L18P protein, length: 187 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 74 315
95 % 9 74 468
90 % 9 74 496
70 % 9 74 540
50 % 9 76 609
40 % 9 76 652
30 % 9 78 637
Entity #15 | Chains: O
50S ribosomal protein L18e protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 68 362
95 % 9 68 538
90 % 9 68 567
70 % 9 68 618
50 % 9 70 679
40 % 9 70 724
30 % 9 70 729
Entity #16 | Chains: P
50S ribosomal protein L19e protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 47 685
95 % 9 68 536
90 % 9 68 564
70 % 9 68 615
50 % 9 68 706
40 % 9 70 721
30 % 9 71 711
Entity #17 | Chains: Q
50S ribosomal protein L21e protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 68 363
95 % 9 68 540
90 % 9 68 570
70 % 9 68 621
50 % 9 70 681
40 % 9 70 726
30 % 9 71 715
Entity #18 | Chains: R
50S ribosomal protein L22P protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 67 372
95 % 9 68 534
90 % 9 68 562
70 % 9 68 613
50 % 9 68 703
40 % 9 68 743
30 % 9 144 257
Entity #19 | Chains: S
50S ribosomal protein L23P protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 74 323
95 % 9 74 476
90 % 9 74 505
70 % 9 74 551
50 % 9 76 611
40 % 9 78 628
30 % 11 369 54
Entity #2 | Chains: B
50S ribosomal protein L3P protein, length: 338 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 67 370
95 % 9 74 461
90 % 9 74 490
70 % 9 74 536
50 % 9 74 622
40 % 9 149 235
30 % 9 149 247
Entity #20 | Chains: T
50S ribosomal protein L24P protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 74 321
95 % 9 74 474
90 % 9 74 503
70 % 9 74 549
50 % 9 149 215
40 % 9 149 240
30 % 9 149 252
Entity #21 | Chains: U
50S ribosomal protein L24e protein, length: 67 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 70 346
95 % 9 70 515
90 % 9 70 542
70 % 9 70 591
50 % 9 70 682
40 % 9 70 727
30 % 9 70 730
Entity #22 | Chains: V
50S ribosomal protein L29P protein, length: 71 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 74 324
95 % 9 74 477
90 % 9 74 506
70 % 9 74 552
50 % 9 74 637
40 % 9 74 681
30 % 9 74 679
Entity #23 | Chains: W
50S ribosomal protein L30P protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 68 360
95 % 9 68 535
90 % 9 68 563
70 % 9 68 614
50 % 9 68 704
40 % 9 70 720
30 % 9 71 710
Entity #24 | Chains: X
50S ribosomal protein L31e protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 68 365
95 % 9 68 542
90 % 9 68 572
70 % 9 68 623
50 % 9 68 709
40 % 9 68 748
30 % 9 68 751
Entity #25 | Chains: Y
50S ribosomal protein L32e protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 63 414
95 % 9 63 614
90 % 9 63 647
70 % 9 63 683
50 % 9 63 762
40 % 9 63 797
30 % 9 63 799
Entity #26 | Chains: Z
50S ribosomal protein L37Ae protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 17 2651
95 % 1 17 3341
90 % 1 17 3392
70 % 1 17 3364
50 % 1 17 3288
40 % 1 17 3181
30 % 1 17 2975
Entity #27 | Chains: 1
50S ribosomal protein L37e protein, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 68 366
95 % 9 68 543
90 % 9 68 573
70 % 9 68 624
50 % 9 69 694
40 % 9 69 737
30 % 9 69 743
Entity #28 | Chains: 2
50S ribosomal protein L39e protein, length: 50 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 47 696
95 % 9 68 545
90 % 9 68 574
70 % 9 68 625
50 % 9 142 226
40 % 9 142 256
30 % 9 142 263
Entity #29 | Chains: 3
50S ribosomal protein L44E protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 68 364
95 % 9 68 541
90 % 9 68 571
70 % 9 68 622
50 % 9 68 708
40 % 9 68 747
30 % 9 139 272
Entity #3 | Chains: C
50S ribosomal protein L4P protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 23 1749
95 % 9 74 464
90 % 9 74 493
70 % 9 74 539
50 % 9 74 625
40 % 9 76 651
30 % 9 77 644
Entity #30 | Chains: 0
23S RIBOSOMAL RNA rna, length: 2923 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #31 | Chains: 9
5S RIBOSOMAL RNA rna, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
50S ribosomal protein L5P protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 74 317
95 % 9 74 470
90 % 9 74 498
70 % 9 74 542
50 % 9 74 629
40 % 10 150 233
30 % 10 150 246
Entity #5 | Chains: E
50S ribosomal protein L6P protein, length: 178 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 68 359
95 % 9 68 533
90 % 9 68 561
70 % 9 68 612
50 % 9 68 702
40 % 9 144 248
30 % 12 437 36
Entity #6 | Chains: F
50S ribosomal protein L7Ae protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 47 688
95 % 8 47 968
90 % 9 68 566
70 % 9 68 617
50 % 19 98 342
40 % 24 112 311
30 % 24 114 321
Entity #7 | Chains: G
50S ribosomal protein L10E protein, length: 348 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 20 2060
95 % 8 64 591
90 % 8 64 622
70 % 8 64 665
50 % 8 64 750
40 % 8 64 783
30 % 8 65 778
Entity #8 | Chains: H
50S ribosomal protein L10e protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 47 682
95 % 8 47 966
90 % 8 47 990
70 % 8 47 1032
50 % 9 74 630
40 % 9 79 616
30 % 9 79 626
Entity #9 | Chains: I
50S ribosomal protein L11P protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 42 798
95 % 8 42 1100
90 % 8 42 1121
70 % 8 42 1158
50 % 8 43 1168
40 % 8 43 1189
30 % 8 67 758

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.