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CSL (Lag-1) bound to DNA with Lin-12 RAM peptide, C2221
Sequence Clustering and Redundancy Reduction Results
3BRF
Sequence Clusters for the Sequence Entities in PDB 3BRF
Entity #1: Chains: B - DNA (5'-D(*DTP*DTP*DAP*DCP*DTP*DGP*DTP*DGP*DGP*DGP*DAP*DAP*DAP*DGP*DA)-3') dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: C - DNA (5'-D(*DAP*DAP*DTP*DCP*DTP*DTP*DTP*DCP*DCP*DCP*DAP*DCP*DAP*DGP*DT)-3') dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: A - Lin-12 and glp-1 phenotype protein 1, isoform a protein, length: 478 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 4 12797
95% 2 4 11987
90% 2 4 11792
70% 2 4 11122
50% 4 10 3867
40% 4 10 3681
30% 4 10 3394
Entity #4: Chains: D - Protein lin-12 protein, length: 14 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.