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CSL (Lag-1) bound to DNA with Lin-12 RAM peptide, P212121
Sequence Clustering and Redundancy Reduction Results
3BRD
Sequence Clusters for the Sequence Entities in PDB 3BRD
Entity #1: Chains: B - DNA (5'-D(*DTP*DTP*DAP*DCP*DTP*DGP*DTP*DGP*DGP*DGP*DAP*DAP*DAP*DGP*DA)-3') dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: C - DNA (5'-D(*DAP*DAP*DTP*DCP*DTP*DTP*DTP*DCP*DCP*DCP*DAP*DCP*DAP*DGP*DT)-3') dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: A - Lin-12 and glp-1 phenotype protein 1, isoform a protein, length: 477 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 4 13353
95% 1 4 12402
90% 1 4 12194
70% 1 4 11512
50% 2 10 4016
40% 2 10 3821
30% 2 10 3509
Entity #4: Chains: D - Protein lin-12 protein, length: 29 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 60694
95% 1 1 42569
90% 1 1 40644
70% 1 1 36048
50% 1 1 31001
40% 1 1 27416
30% 1 1 23297
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.