Sequence Similarity Clusters for the Entities in PDB 3ALZ

Entity #1 | Chains: A
Hemagglutinin protein, length: 481 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 28732
95 % 6 6 11409 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.4
PDBFlex
90 % 6 6 11242
70 % 6 6 10636
50 % 6 6 9551
40 % 6 6 8621
30 % 6 6 7447
Entity #2 | Chains: B
CDw150 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58494
95 % 1 1 47935
90 % 1 1 45501
70 % 1 1 39964
50 % 1 1 33926
40 % 1 1 29698
30 % 1 1 24821

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2ZB6 1 A Hemagglutinin protein head domain, UNP residues 149-617 11234
2 2RKC 1 A Hemagglutinin Extracellular domain (156-617) 11234
3 2ZB5 1 A Hemagglutinin protein head domain, UNP residues 149-617 11234
4 3INB 1 A, B Hemagglutinin glycoprotein Head domain, residues 179-617 11234
5 4GJT 1 A Hemagglutinin glycoprotein MV-H fragment, 156-617 11234
6 3ALZ 1 A Hemagglutinin head domain 11234