Sequence Similarity Clusters for the Entities in PDB 3ALZ

Entity #1 | Chains: A
Hemagglutinin protein, length: 481 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 33080
95 % 6 6 12276 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.4
PDBFlex
90 % 6 6 12163
70 % 6 6 11565
50 % 6 6 10607
40 % 6 6 9986
30 % 6 6 9216
Entity #2 | Chains: B
CDw150 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69962
95 % 1 1 50235
90 % 1 1 47504
70 % 1 1 41759
50 % 1 1 36100
40 % 1 1 32637
30 % 1 1 28781

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures