Sequence Similarity Clusters for the Entities in PDB 3ALZ

Entity #1 | Chains: A
Hemagglutinin protein, length: 481 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 31306
95 % 6 6 12226 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.4
PDBFlex
90 % 6 6 12295
70 % 6 6 11717
50 % 6 6 10722
40 % 6 6 10091
30 % 6 6 9316
Entity #2 | Chains: B
CDw150 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69766
95 % 1 1 50117
90 % 1 1 47449
70 % 1 1 41681
50 % 1 1 36053
40 % 1 1 32613
30 % 1 1 28753

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures