Sequence Similarity Clusters for the Entities in PDB 3ALX

Entity #1 | Chains: A,B,C,D
Hemagglutinin,LINKER,CDw150 protein, length: 559 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21883
95 % 1 2 15297 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.0
PDBFlex
90 % 1 2 14983
70 % 1 2 14013
50 % 1 2 12382
40 % 1 2 11117
30 % 1 2 9454

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures