Sequence Similarity Clusters for the Entities in PDB 3AL4

Entity #1 | Chains: A,C,E,G,I,K
Hemagglutinin protein, length: 333 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 2065
95 % 14 17 576 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.8
PDBFlex
90 % 14 18 579
70 % 34 49 250
50 % 134 160 80
40 % 247 298 17
30 % 254 305 26
Entity #2 | Chains: B,D,F,H,J,L
Hemagglutinin protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 13 607
95 % 33 47 217 Flexibility: Low
Max RMSD: 5.9, Avg RMSD: 1.3
PDBFlex
90 % 33 47 227
70 % 133 161 44
50 % 245 296 11
40 % 249 306 15
30 % 249 306 27

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.