Sequence Similarity Clusters for the Entities in PDB 3AL4

Entity #1 | Chains: A,C,E,G,I,K
Hemagglutinin protein, length: 333 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 1534
95 % 14 19 513 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.8
PDBFlex
90 % 14 20 526
70 % 45 62 181
50 % 145 173 77
40 % 274 327 17
30 % 281 334 25
Entity #2 | Chains: B,D,F,H,J,L
Hemagglutinin protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 13 624
95 % 44 59 155 Flexibility: Low
Max RMSD: 5.9, Avg RMSD: 1.2
PDBFlex
90 % 44 59 167
70 % 144 173 30
50 % 272 324 10
40 % 276 334 15
30 % 276 334 26

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.