Sequence Similarity Clusters for the Entities in PDB 2ZD1

Entity #1 | Chains: A
Reverse transcriptase/ribonuclease H protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 45 854
95 % 4 258 114 Flexibility: Medium
Max RMSD: 23.5, Avg RMSD: 3.9
PDBFlex
90 % 4 258 119
70 % 4 258 132
50 % 4 259 161
40 % 4 260 172
30 % 4 260 190
Entity #2 | Chains: B
p51 RT protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 118 219
95 % 4 252 120 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.5
PDBFlex
90 % 4 252 123
70 % 4 252 140
50 % 4 254 169
40 % 4 254 182
30 % 4 254 201

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures