Sequence Similarity Clusters for the Entities in PDB 2ZD1

Entity #1 | Chains: A
Reverse transcriptase/ribonuclease H protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 37 1028
95 % 4 248 82 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 4.0
PDBFlex
90 % 4 248 87
70 % 4 248 105
50 % 4 249 142
40 % 4 249 158
30 % 4 249 176
Entity #2 | Chains: B
p51 RT protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 105 196
95 % 4 242 107
90 % 4 242 112
70 % 4 242 130
50 % 4 243 152
40 % 4 243 170
30 % 4 243 184

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.