Sequence Similarity Clusters for the Entities in PDB 2YPT

Entity #1 | Chains: A,B,D,E
CAAX PRENYL PROTEASE 1 HOMOLOG protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 15652
95 % 3 3 6826
90 % 3 3 6807
70 % 3 3 6629
50 % 3 3 6150
40 % 3 3 5755
30 % 3 3 5152
Entity #2 | Chains: F,G,H,I
PRELAMIN-A/C protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.