Sequence Similarity Clusters for the Entities in PDB 2YPQ

Entity #1 | Chains: A,B
PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE AROG protein, length: 462 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 20 961
95 % 17 20 1304 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.2
PDBFlex
90 % 17 20 1330
70 % 17 20 1350
50 % 18 23 1223
40 % 18 23 1238
30 % 18 23 1211

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.