Sequence Similarity Clusters for the Entities in PDB 2YPO

Entity #1 | Chains: A,B
PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE AROG protein, length: 462 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 20 1007
95 % 1 20 1359 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.2
PDBFlex
90 % 1 20 1381
70 % 1 20 1392
50 % 2 26 1190
40 % 2 26 1196
30 % 2 26 1182

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures