Sequence Similarity Clusters for the Entities in PDB 2YPO

Entity #1 | Chains: A,B
PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE AROG protein, length: 462 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 20 1131
95 % 1 20 1549 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.2
PDBFlex
90 % 1 20 1583
70 % 1 20 1608
50 % 1 23 1432
40 % 2 26 1382
30 % 2 26 1426

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures