Sequence Similarity Clusters for the Entities in PDB 2YPO

Entity #1 | Chains: A,B
PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE AROG protein, length: 462 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 20 1189
95 % 1 20 1414 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.2
PDBFlex
90 % 1 20 1436
70 % 1 20 1446
50 % 2 26 1225
40 % 2 26 1221
30 % 2 26 1218

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures