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An Information Portal to 107049 Biological Macromolecular Structures

Structure of the AvrBs3-DNA complex provides new insights into the initial thymine-recognition mechanism
Sequence Clustering and Redundancy Reduction Results
2YPF
Sequence Clusters for the Sequence Entities in PDB 2YPF
Entity #1: Chains: A - AVRBS3 protein, length: 758 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 39092
95% 1 1 29342
90% 1 1 28202
70% 1 1 25436
50% 1 1 22020
40% 1 1 19609
30% 1 1 16789
Entity #2: Chains: B - 5'-D(*TP*TP*TP*AP*TP*AP*TP*AP*AP*AP*CP*CP*TP*AP *AP*CP*CP*CP*TP*CP*TP*AP)-3' dna, length: 22 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C - 5'-D(*TP*AP*GP*AP*GP*GP*GP*TP*TP*AP*GP*GP*TP*TP *TP*AP*TP*AP*TP*AP*AP)-3' dna, length: 21 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.