Sequence Similarity Clusters for the Entities in PDB 2YO1

Entity #1 | Chains: A,B,C
GENERAL CONTROL PROTEIN GCN4, PUTATIVE INNER MEMBRANE PROTEIN protein, length: 322 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 19500
95 % 2 2 17324 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 2.4
PDBFlex
90 % 2 2 16982
70 % 2 2 15802
50 % 2 2 13843
40 % 2 2 12423
30 % 9 9 2989

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures