Sequence Similarity Clusters for the Entities in PDB 2YNY

Entity #1 | Chains: A,B,C
GENERAL CONTROL PROTEIN GCN4, PUTATIVE INNER MEMBRANE PROTEIN protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29252
95 % 1 1 24253 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.6
PDBFlex
90 % 1 1 23468
70 % 1 1 21361
50 % 1 8 2795
40 % 1 9 2632
30 % 1 12 1706

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.