Sequence Similarity Clusters for the Entities in PDB 2YNS

Entity #1 | Chains: A,B
IMPORTIN SUBUNIT ALPHA-1A protein, length: 490 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 7876
95 % 3 5 8365 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.8
PDBFlex
90 % 3 5 8309
70 % 3 5 7997
50 % 22 97 443
40 % 23 101 456
30 % 23 101 455
Entity #2 | Chains: C,D
B54NLS protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.