Sequence Similarity Clusters for the Entities in PDB 2YNR

Entity #1 | Chains: A
IMPORTIN SUBUNIT ALPHA protein, length: 461 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 46 67 531
95 % 46 67 720 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.6
PDBFlex
90 % 54 78 605
70 % 54 78 645
50 % 62 102 444
40 % 64 106 457
30 % 64 106 454
Entity #2 | Chains: B,C
B54NLS protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures