Sequence Similarity Clusters for the Entities in PDB 2YNO

Entity #1 | Chains: A,B
COATOMER SUBUNIT BETA' protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 28770
95 % 10 10 4389 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 10 10 4434
70 % 10 10 4325
50 % 10 10 4179
40 % 10 10 3950
30 % 11 13 2906
Entity #2 | Chains: P
POLY ALA protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures