Sequence Similarity Clusters for the Entities in PDB 2YNO

Entity #1 | Chains: A,B
COATOMER SUBUNIT BETA' protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 26588
95 % 10 10 4069 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 10 10 4109
70 % 10 10 4047
50 % 10 10 3908
40 % 10 10 3740
30 % 10 10 3491
Entity #2 | Chains: P
POLY ALA protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures