Sequence Similarity Clusters for the Entities in PDB 2YNN

Entity #1 | Chains: A
COATOMER SUBUNIT BETA' protein, length: 304 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28943
95 % 8 10 4405 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 8 10 4451
70 % 8 10 4344
50 % 8 10 4195
40 % 8 10 3970
30 % 9 13 2912
Entity #2 | Chains: P
KTKTN MOTIF protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures