Sequence Similarity Clusters for the Entities in PDB 2YNN

Entity #1 | Chains: A
COATOMER SUBUNIT BETA' protein, length: 304 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29551
95 % 8 10 4441 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 8 10 4486
70 % 8 10 4388
50 % 8 10 4215
40 % 8 10 3988
30 % 9 13 2947
Entity #2 | Chains: P
KTKTN MOTIF protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures