2YNM

Structure of the ADPxAlF3-Stabilized Transition State of the Nitrogenase-like Dark-Operative Protochlorophyllide Oxidoreductase Complex from Prochlorococcus marinus with Its Substrate Protochlorophyllide a


Sequence Similarity Clusters for the Entities in PDB 2YNM

Entity #1 | Chains: A,B
LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE IRON-SULFUR ATP-BINDING PROTEIN protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 34942
95 % 1 1 27398
90 % 1 1 26475
70 % 1 1 24011
50 % 2 2 13057
40 % 2 2 11731
30 % 2 2 10096
Entity #2 | Chains: C
LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE SUBUNIT N protein, length: 426 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50414
95 % 1 1 36836
90 % 1 1 35253
70 % 1 1 31454
50 % 1 7 4489
40 % 1 7 4273
30 % 1 7 3925
Entity #3 | Chains: D
LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE SUBUNIT B protein, length: 530 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49053
95 % 1 1 36218
90 % 1 1 34659
70 % 1 1 30963
50 % 1 7 4462
40 % 1 7 4254
30 % 1 8 3650

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.