Sequence Similarity Clusters for the Entities in PDB 2YNM

Entity #1 | Chains: A,B
LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE IRON-SULFUR ATP-BINDING PROTEIN protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 31839
95 % 1 1 25023
90 % 1 1 24190
70 % 1 1 21969
50 % 2 2 11999
40 % 2 2 10829
30 % 2 2 9361
Entity #2 | Chains: C
LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE SUBUNIT N protein, length: 426 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46140
95 % 1 1 33784
90 % 1 1 32371
70 % 1 1 28961
50 % 1 7 4108
40 % 1 7 3918
30 % 1 7 3622
Entity #3 | Chains: D
LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE SUBUNIT B protein, length: 530 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44896
95 % 1 1 33208
90 % 1 1 31814
70 % 1 1 28503
50 % 1 7 4085
40 % 1 7 3902
30 % 1 8 3356

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.