POP-OUT | CLOSE

An Information Portal to 111749 Biological Macromolecular Structures

Structure of the ADPxAlF3-Stabilized Transition State of the Nitrogenase-like Dark-Operative Protochlorophyllide Oxidoreductase Complex from Prochlorococcus marinus with Its Substrate Protochlorophyllide a
Sequence Clustering and Redundancy Reduction Results
2YNM
Sequence Clusters for the Sequence Entities in PDB 2YNM
Entity #1: Chains: A,B - LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE IRON-SULFUR ATP-BINDING PROTEIN protein, length: 301 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 29655
95% 1 1 23378
90% 1 1 22629
70% 1 1 20615
50% 2 2 11266
40% 2 2 10185
30% 2 2 8830
Entity #2: Chains: C - LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE SUBUNIT N protein, length: 426 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 43063
95% 1 1 31641
90% 1 1 30363
70% 1 1 27238
50% 1 7 3848
40% 1 7 3665
30% 1 7 3394
Entity #3: Chains: D - LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE SUBUNIT B protein, length: 530 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 41925
95% 1 1 31100
90% 1 1 29840
70% 1 1 26806
50% 1 7 3825
40% 1 7 3652
30% 1 8 3155
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.