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An Information Portal to 108395 Biological Macromolecular Structures

Structure of the ADPxAlF3-Stabilized Transition State of the Nitrogenase-like Dark-Operative Protochlorophyllide Oxidoreductase Complex from Prochlorococcus marinus with Its Substrate Protochlorophyllide a
Sequence Clustering and Redundancy Reduction Results
2YNM
Sequence Clusters for the Sequence Entities in PDB 2YNM
Entity #1: Chains: A,B - LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE IRON-SULFUR ATP-BINDING PROTEIN protein, length: 301 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 28616
95% 1 1 22594
90% 1 1 21901
70% 1 1 20004
50% 2 2 10914
40% 2 2 9864
30% 2 2 8560
Entity #2: Chains: C - LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE SUBUNIT N protein, length: 426 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 41706
95% 1 1 30711
90% 1 1 29513
70% 1 1 26514
50% 1 7 3715
40% 1 7 3547
30% 1 7 3274
Entity #3: Chains: D - LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE SUBUNIT B protein, length: 530 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 40592
95% 1 1 30172
90% 1 1 28993
70% 1 1 26086
50% 1 7 3692
40% 1 7 3533
30% 1 8 3053
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.