Sequence Similarity Clusters for the Entities in PDB 2YNM

Entity #1 | Chains: A,B
LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE IRON-SULFUR ATP-BINDING PROTEIN protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 32265
95 % 1 1 25329
90 % 1 1 24486
70 % 1 1 22235
50 % 2 2 12155
40 % 2 2 10952
30 % 2 2 9474
Entity #2 | Chains: C
LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE SUBUNIT N protein, length: 426 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46715
95 % 1 1 34171
90 % 1 1 32751
70 % 1 1 29311
50 % 1 7 4163
40 % 1 7 3967
30 % 1 7 3665
Entity #3 | Chains: D
LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE SUBUNIT B protein, length: 530 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45452
95 % 1 1 33591
90 % 1 1 32189
70 % 1 1 28851
50 % 1 7 4139
40 % 1 7 3948
30 % 1 8 3396

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.