2YNM

Structure of the ADPxAlF3-Stabilized Transition State of the Nitrogenase-like Dark-Operative Protochlorophyllide Oxidoreductase Complex from Prochlorococcus marinus with Its Substrate Protochlorophyllide a


Sequence Similarity Clusters for the Entities in PDB 2YNM

Entity #1 | Chains: A,B
LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE IRON-SULFUR ATP-BINDING PROTEIN protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36006
95 % 1 1 28231
90 % 1 1 27257
70 % 1 1 24636
50 % 2 2 13446
40 % 2 2 12077
30 % 2 2 10407
Entity #2 | Chains: C
LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE SUBUNIT N protein, length: 426 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51873
95 % 1 1 37914
90 % 1 1 36245
70 % 1 1 32293
50 % 1 7 4650
40 % 1 7 4411
30 % 1 7 4054
Entity #3 | Chains: D
LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE SUBUNIT B protein, length: 530 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50475
95 % 1 1 37279
90 % 1 1 35637
70 % 1 1 31793
50 % 1 7 4622
40 % 1 7 4388
30 % 1 8 3760

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.