Sequence Similarity Clusters for the Entities in PDB 2YNH

Entity #1 | Chains: A
REVERSE TRANSCRIPTASE/RIBONUCLEASE H protein, length: 563 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 47 61 522
95 % 129 248 88 Flexibility: Medium
Max RMSD: 23.3, Avg RMSD: 4.0
PDBFlex
90 % 129 248 93
70 % 129 248 111
50 % 130 249 147
40 % 130 249 162
30 % 130 249 179
Entity #2 | Chains: B
P51 RT protein, length: 447 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 44 57 637
95 % 125 242 112 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.6
PDBFlex
90 % 125 242 116
70 % 125 242 131
50 % 126 243 154
40 % 126 243 172
30 % 126 243 187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.