Sequence Similarity Clusters for the Entities in PDB 2YNG

Entity #1 | Chains: A
REVERSE TRANSCRIPTASE/RIBONUCLEASE H protein, length: 563 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 32 1493
95 % 24 278 109 Flexibility: Medium
Max RMSD: 23.5, Avg RMSD: 3.9
PDBFlex
90 % 24 278 115
70 % 24 278 131
50 % 24 279 156
40 % 24 280 165
30 % 24 280 184
Entity #2 | Chains: B
P51 RT protein, length: 447 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 83 456
95 % 24 272 113 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.5
PDBFlex
90 % 24 272 119
70 % 24 272 133
50 % 24 274 161
40 % 24 274 172
30 % 24 274 188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures