Sequence Similarity Clusters for the Entities in PDB 2YKJ

Entity #1 | Chains: A
HEAT SHOCK PROTEIN HSP 90-ALPHA protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 14 5048
95 % 58 275 111 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.0
PDBFlex
90 % 58 284 106
70 % 65 344 79
50 % 67 379 94
40 % 67 380 110
30 % 67 380 122

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures