Sequence Similarity Clusters for the Entities in PDB 2YFV

Entity #1 | Chains: A
HISTONE H3-LIKE CENTROMERIC PROTEIN CSE4 protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75323
95 % 1 1 49929
90 % 1 1 44254
70 % 1 1 39086
50 % 1 17 1804
40 % 1 17 1846
30 % 1 17 1877
Entity #2 | Chains: B
HISTONE H4 protein, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63955
95 % 1 1 53424
90 % 5 22 1618
70 % 5 22 1604
50 % 5 22 1632
40 % 5 22 1671
30 % 5 22 1710
Entity #3 | Chains: C
SCM3 protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75326
95 % 1 1 46697
90 % 1 1 44255
70 % 1 1 39087
50 % 1 1 33822
40 % 1 1 30585
30 % 1 1 27032

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures