Sequence Similarity Clusters for the Entities in PDB 2XWB

Entity #1 | Chains: A,C
COMPLEMENT C3B BETA CHAIN protein, length: 642 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 15 1274
95 % 8 21 1269
90 % 8 21 1288
70 % 8 21 1318
50 % 8 21 1371
40 % 11 24 1249
30 % 11 24 1229
Entity #2 | Chains: B,D
COMPLEMENT C3B ALPHA' CHAIN protein, length: 912 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 8 3307
95 % 6 14 2061
90 % 6 14 2116
70 % 6 14 2131
50 % 6 14 2146
40 % 6 14 2145
30 % 6 14 2050
Entity #3 | Chains: F,H
COMPLEMENT FACTOR B protein, length: 732 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 6071
95 % 4 5 5835
90 % 4 5 5826
70 % 4 5 5700
50 % 4 5 5350
40 % 4 5 5032
30 % 4 5 4539
Entity #4 | Chains: I,J
COMPLEMENT FACTOR D protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24663
95 % 14 14 2020
90 % 14 14 2075
70 % 14 14 2099
50 % 14 14 2111
40 % 1560 1591 4
30 % 1693 1733 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.