Sequence Similarity Clusters for the Entities in PDB 2XWB

Entity #1 | Chains: A,C
COMPLEMENT C3B BETA CHAIN protein, length: 642 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 15 1338
95 % 8 21 1312
90 % 8 21 1336
70 % 8 21 1363
50 % 8 21 1414
40 % 11 24 1288
30 % 11 24 1264
Entity #2 | Chains: B,D
COMPLEMENT C3B ALPHA' CHAIN protein, length: 912 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 8 3445
95 % 6 14 2181
90 % 6 14 2243
70 % 6 14 2238
50 % 6 14 2221
40 % 6 14 2219
30 % 6 14 2121
Entity #3 | Chains: F,H
COMPLEMENT FACTOR B protein, length: 732 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 6294
95 % 4 5 6016
90 % 4 5 6007
70 % 4 5 5869
50 % 4 5 5505
40 % 4 5 5165
30 % 4 5 4653
Entity #4 | Chains: I,J
COMPLEMENT FACTOR D protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 25376
95 % 17 19 1139
90 % 17 19 1163
70 % 17 19 1212
50 % 18 20 1149
40 % 1571 1606 4
30 % 1704 1748 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.