Sequence Similarity Clusters for the Entities in PDB 2XWB

Entity #1 | Chains: A,C
COMPLEMENT C3B BETA CHAIN protein, length: 642 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 18 1189
95 % 8 24 1201
90 % 8 24 1228
70 % 8 24 1259
50 % 8 24 1313
40 % 11 27 1221
30 % 11 27 1195
Entity #2 | Chains: B,D
COMPLEMENT C3B ALPHA' CHAIN protein, length: 912 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 8 3685
95 % 6 17 1909
90 % 6 17 1955
70 % 6 17 1978
50 % 6 17 1987
40 % 6 17 1978
30 % 6 17 1910
Entity #3 | Chains: F,H
COMPLEMENT FACTOR B protein, length: 732 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 6789
95 % 4 5 6481
90 % 4 5 6459
70 % 4 5 6306
50 % 4 5 5883
40 % 4 5 5506
30 % 4 5 4952
Entity #4 | Chains: I,J
COMPLEMENT FACTOR D protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 27091
95 % 24 26 1039
90 % 24 26 1058
70 % 24 26 1095
50 % 25 27 1067
40 % 1646 1684 4
30 % 1785 1833 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.