Sequence Similarity Clusters for the Entities in PDB 2XWB

Entity #1 | Chains: A,C
COMPLEMENT C3B BETA CHAIN protein, length: 642 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 15 1260
95 % 8 21 1261
90 % 8 21 1279
70 % 8 21 1307
50 % 8 21 1355
40 % 11 24 1242
30 % 11 24 1221
Entity #2 | Chains: B,D
COMPLEMENT C3B ALPHA' CHAIN protein, length: 912 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 8 3273
95 % 6 14 2043
90 % 6 14 2097
70 % 6 14 2110
50 % 6 14 2124
40 % 6 14 2123
30 % 6 14 2028
Entity #3 | Chains: F,H
COMPLEMENT FACTOR B protein, length: 732 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 5998
95 % 4 5 5771
90 % 4 5 5763
70 % 4 5 5642
50 % 4 5 5304
40 % 4 5 4986
30 % 4 5 4505
Entity #4 | Chains: I,J
COMPLEMENT FACTOR D protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24412
95 % 14 14 2002
90 % 14 14 2055
70 % 14 14 2080
50 % 14 14 2090
40 % 1554 1585 4
30 % 1687 1727 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.