Sequence Similarity Clusters for the Entities in PDB 2XVD

Entity #1 | Chains: A
EPHRIN TYPE-B RECEPTOR 4 protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 11 5757
95 % 6 14 4111 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.9
PDBFlex
90 % 6 14 4147
70 % 33 69 548
50 % 33 69 585
40 % 120 1071 6
30 % 329 3941 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures