Sequence Similarity Clusters for the Entities in PDB 2XVD

Entity #1 | Chains: A
EPHRIN TYPE-B RECEPTOR 4 protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 11 5604
95 % 6 14 4019 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.9
PDBFlex
90 % 6 14 4055
70 % 33 69 502
50 % 33 69 567
40 % 120 1062 6
30 % 313 3825 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.