Sequence Similarity Clusters for the Entities in PDB 2XVD

Entity #1 | Chains: A
EPHRIN TYPE-B RECEPTOR 4 protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 11 5884
95 % 6 14 4214 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.9
PDBFlex
90 % 6 14 4255
70 % 33 69 558
50 % 33 69 594
40 % 121 1087 6
30 % 375 4073 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures