Sequence Similarity Clusters for the Entities in PDB 2XUM

Entity #1 | Chains: A
HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52961
95 % 8 35 1499 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 8 35 1528
70 % 8 35 1540
50 % 8 35 1568
40 % 8 35 1592
30 % 8 35 1568
Entity #2 | Chains: S
ASP-SUBSTRATE PEPTIDE 2 protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73106
95 % 1 3 24341
90 % 1 3 23551
70 % 1 3 21525
50 % 1 3 18691
40 % 1 3 16658
30 % 1 3 14308

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.