Sequence Similarity Clusters for the Entities in PDB 2XUM

Entity #1 | Chains: A
HYPOXIA-INDUCIBLE FACTOR 1-ALPHA INHIBITOR protein, length: 349 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55616
95 % 8 38 1433
90 % 8 38 1460
70 % 8 38 1463
50 % 8 38 1518
40 % 8 38 1530
30 % 8 38 1502
Entity #2 | Chains: S
ASP-SUBSTRATE PEPTIDE 2 protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 76686
95 % 1 3 25669
90 % 1 3 24800
70 % 1 3 22525
50 % 1 3 19496
40 % 1 3 17360
30 % 1 3 14907

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures