Sequence Similarity Clusters for the Entities in PDB 2XTT

Entity #1 | Chains: A
PROTEASE INHIBITOR SGPI-1 protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 76352
95 % 1 1 53118
90 % 1 1 50339
70 % 1 10 5383
50 % 1 10 5128
40 % 1 10 4841
30 % 1 10 4428
Entity #2 | Chains: B
CATIONIC TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 412 39
95 % 18 471 18 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 18 471 20
70 % 18 557 19
50 % 18 708 14
40 % 32 1863 4
30 % 32 1885 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures