Sequence Similarity Clusters for the Entities in PDB 2XTT

Entity #1 | Chains: A
PROTEASE INHIBITOR SGPI-1 protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74456
95 % 1 1 51895
90 % 1 1 49225
70 % 1 10 5213
50 % 1 10 4981
40 % 1 10 4714
30 % 1 10 4312
Entity #2 | Chains: B
CATIONIC TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 389 37
95 % 12 448 33 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 12 448 34
70 % 12 532 19
50 % 12 683 14
40 % 26 1698 4
30 % 26 1848 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures