Sequence Similarity Clusters for the Entities in PDB 2XTT

Entity #1 | Chains: A
PROTEASE INHIBITOR SGPI-1 protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72402
95 % 1 1 50419
90 % 1 1 47881
70 % 1 10 5049
50 % 1 10 4830
40 % 1 10 4569
30 % 1 10 4183
Entity #2 | Chains: B
CATIONIC TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 383 40
95 % 12 442 31 Flexibility: No
Max RMSD: 2.2, Avg RMSD: 0.4
PDBFlex
90 % 12 442 33
70 % 12 526 18
50 % 12 677 14
40 % 25 1682 4
30 % 25 1831 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.