Sequence Similarity Clusters for the Entities in PDB 2XTT

Entity #1 | Chains: A
PROTEASE INHIBITOR SGPI-1 protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75507
95 % 1 1 52541
90 % 1 1 49812
70 % 1 10 5309
50 % 1 10 5065
40 % 1 10 4789
30 % 1 10 4375
Entity #2 | Chains: B
CATIONIC TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 405 37
95 % 17 464 20 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 17 464 21
70 % 17 548 19
50 % 17 699 14
40 % 31 1721 4
30 % 31 1871 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures