Sequence Similarity Clusters for the Entities in PDB 2XTT

Entity #1 | Chains: A
PROTEASE INHIBITOR SGPI-1 protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62946
95 % 1 1 49721
90 % 1 1 47172
70 % 1 10 5347
50 % 1 10 4949
40 % 1 10 4654
30 % 1 10 4184
Entity #2 | Chains: B
CATIONIC TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 425 38
95 % 17 471 21 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 17 471 23
70 % 17 558 19
50 % 17 710 14
40 % 31 1885 4
30 % 31 1899 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures