Sequence Similarity Clusters for the Entities in PDB 2XSZ

Entity #1 | Chains: A,B,C
RUVB-LIKE 1 protein, length: 367 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 26247
95 % 1 1 22158 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 21529
70 % 1 1 19760
50 % 1 1 17154
40 % 1 3 3300
30 % 1 3 3096
Entity #2 | Chains: D,E,F
RUVB-LIKE 2 protein, length: 378 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 26173
95 % 1 2 4402 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 0.8
PDBFlex
90 % 1 2 4429
70 % 1 2 4345
50 % 1 2 4183
40 % 2 3 3300
30 % 2 3 3096

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures