Sequence Similarity Clusters for the Entities in PDB 2XSZ

Entity #1 | Chains: A,B,C
RUVB-LIKE 1 protein, length: 367 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 25293
95 % 1 1 21358 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 20762
70 % 1 1 19118
50 % 1 1 16622
40 % 1 3 3198
30 % 1 3 2995
Entity #2 | Chains: D,E,F
RUVB-LIKE 2 protein, length: 378 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 25221
95 % 1 2 4246 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 0.8
PDBFlex
90 % 1 2 4272
70 % 1 2 4191
50 % 1 2 4052
40 % 2 3 3198
30 % 2 3 2995

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.