Sequence Similarity Clusters for the Entities in PDB 2XSZ

Entity #1 | Chains: A,B,C
RUVB-LIKE 1 protein, length: 367 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28357
95 % 1 1 24817 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 23974
70 % 2 5 4604
50 % 2 11 2529
40 % 3 23 1016
30 % 3 23 1005
Entity #2 | Chains: D,E,F
RUVB-LIKE 2 protein, length: 378 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28356
95 % 1 2 4597 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 0.8
PDBFlex
90 % 1 2 4636
70 % 2 6 2520
50 % 2 12 1728
40 % 4 23 1016
30 % 4 23 1005

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures