Sequence Similarity Clusters for the Entities in PDB 2XQW

Entity #1 | Chains: A,B
COMPLEMENT C3 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 16 1277
95 % 11 16 1713 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.9
PDBFlex
90 % 11 16 1752
70 % 13 18 1465
50 % 13 18 1523
40 % 13 18 1538
30 % 13 18 1514
Entity #2 | Chains: C
COMPLEMENT FACTOR H protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 45085
95 % 9 12 2856 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 9 12 2898
70 % 10 13 2618
50 % 10 13 2585
40 % 10 13 2538
30 % 14 48 664

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.