Sequence Similarity Clusters for the Entities in PDB 2XQW

Entity #1 | Chains: A,B
COMPLEMENT C3 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 17 1201
95 % 11 17 1612 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.9
PDBFlex
90 % 11 17 1643
70 % 13 19 1413
50 % 13 19 1468
40 % 13 19 1469
30 % 13 19 1454
Entity #2 | Chains: C
COMPLEMENT FACTOR H protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 46638
95 % 9 13 2466 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.3
PDBFlex
90 % 9 13 2527
70 % 10 14 2351
50 % 10 14 2330
40 % 10 14 2307
30 % 14 49 649

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures